Stand-alone executable versions of the NGS-QC Generator (version 0.31):
Note: You must use the 64 bits version to analyse BED files larger than 2GB.
Importantly, this version requires BEDtools to be installed on the hosting system. It can be retrieved at:
Stable releases: http://code.google.com/p/bedtools
In addition, genome files required for the executable versions are available here as separate files:
genomes.zip (ce4, ce6, ce10, danRer5, danRer6, danRer7, dm2, dm3, hg18, hg19, mm8, mm9, mm10, rn3, rn4, rn5)
Note: the genome files are already included inside the previous compressed files.